Sequence Similarity Clusters for the Entities in PDB 4GAG

Entity #1 | Chains: H
NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 18157
95 % 1 3 15912
90 % 3 11 3579
70 % 161 1846 1
50 % 328 3804 1
40 % 328 3805 1
30 % 355 4512 1
Entity #2 | Chains: L
NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 18158
95 % 1 34 730
90 % 1 74 234
70 % 130 1565 3
50 % 329 3804 1
40 % 329 3805 1
30 % 356 4512 1
Entity #3 | Chains: P
Genome polyprotein protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.