Sequence Similarity Clusters for the Entities in PDB 4GAE

Entity #1 | Chains: A,B
1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplast protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34222
95 % 13 13 2329 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 13 13 2391
70 % 13 13 2397
50 % 13 13 2375
40 % 55 64 434
30 % 57 66 419

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures