Sequence Similarity Clusters for the Entities in PDB 4G94

Entity #1 | Chains: A
RNA polymerase sigma factor rpoD protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25823
95 % 1 2 22772 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 22049
70 % 1 2 20123
50 % 1 2 17348
40 % 1 2 15345
30 % 1 2 12847
Entity #2 | Chains: B
ORF067 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 18799
95 % 1 3 17194 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.2
PDBFlex
90 % 1 3 16800
70 % 1 3 15605
50 % 1 3 13683
40 % 1 3 12237
30 % 1 3 10338

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures