Sequence Similarity Clusters for the Entities in PDB 4G6V

Entity #1 | Chains: A,C,E,G
Adhesin/hemolysin protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22586
95 % 1 1 19474 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18951
70 % 1 1 17506
50 % 1 1 15198
40 % 1 1 13516
30 % 1 1 11566
Entity #2 | Chains: B,D,F,H
CdiI protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24243
95 % 1 1 20703 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 1 20119
70 % 1 1 18482
50 % 1 1 16038
40 % 1 1 14279
30 % 1 1 12211

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures