Sequence Similarity Clusters for the Entities in PDB 4G6V

Entity #1 | Chains: A,C,E,G
Adhesin/hemolysin protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22990
95 % 1 1 19792 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 19253
70 % 1 1 17771
50 % 1 1 15413
40 % 1 1 13703
30 % 1 1 11721
Entity #2 | Chains: B,D,F,H
CdiI protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24656
95 % 1 1 21030 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 1 20429
70 % 1 1 18753
50 % 1 1 16258
40 % 1 1 14472
30 % 1 1 12373

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures