Sequence Similarity Clusters for the Entities in PDB 4G3Y

Entity #1 | Chains: L
infliximab Fab L protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 16004
95 % 3 3 14961
90 % 34 38 706
70 % 1261 2479 1
50 % 2577 5021 1
40 % 2577 5021 1
30 % 2972 5951 1
Entity #2 | Chains: H
infliximab Fab H protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15919
95 % 3 3 14881
90 % 4 4 12626
70 % 1250 2429 2
50 % 2578 5021 1
40 % 2578 5021 1
30 % 2973 5951 1
Entity #3 | Chains: C
Tumor necrosis factor protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 471
95 % 10 21 339 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 10 21 359
70 % 11 22 390
50 % 11 22 454
40 % 11 22 494
30 % 17 34 404

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures