Sequence Similarity Clusters for the Entities in PDB 4G3Y

Entity #1 | Chains: L
infliximab Fab L protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14982
95 % 3 3 14086
90 % 28 32 858
70 % 1135 2264 1
50 % 2323 4587 1
40 % 2323 4587 1
30 % 2647 5392 1
Entity #2 | Chains: H
infliximab Fab H protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14897
95 % 3 3 14002
90 % 4 4 11885
70 % 1129 2222 2
50 % 2324 4587 1
40 % 2324 4587 1
30 % 2648 5392 1
Entity #3 | Chains: C
Tumor necrosis factor protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 586
95 % 7 18 352 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 7 18 377
70 % 8 19 410
50 % 8 19 484
40 % 8 19 519
30 % 14 31 414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.