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An Information Portal to 108263 Biological Macromolecular Structures

Crystal structure of TNF-alpha in complex with Infliximab Fab fragment
Sequence Clustering and Redundancy Reduction Results
4G3Y
Sequence Clusters for the Sequence Entities in PDB 4G3Y
Entity #1: Chains: L - infliximab Fab L protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48374
95% 1 1 34030
90% 4 7 5498
70% 699 1361 3
50% 1678 3242 1
40% 1679 3243 1
30% 1887 3827 1
Entity #2: Chains: H - infliximab Fab H protein, length: 226 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47470
95% 1 1 33549
90% 2 2 23318
70% 815 1564 2
50% 1679 3242 1
40% 1680 3243 1
30% 1888 3827 1
Entity #3: Chains: C - Tumor necrosis factor protein, length: 157 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 4997
95% 6 15 698
90% 6 15 734
70% 7 16 728
50% 7 16 819
40% 7 16 837
30% 12 26 511
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.