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An Information Portal to 110790 Biological Macromolecular Structures

Crystal structure of TNF-alpha in complex with Infliximab Fab fragment
Sequence Clustering and Redundancy Reduction Results
4G3Y
Sequence Clusters for the Sequence Entities in PDB 4G3Y
Entity #1: Chains: L - infliximab Fab L protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49483
95% 1 1 34772
90% 4 7 5616
70% 729 1434 3
50% 1759 3425 1
40% 1760 3426 1
30% 1974 4043 1
Entity #2: Chains: H - infliximab Fab H protein, length: 226 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48553
95% 1 1 34279
90% 2 2 23866
70% 857 1656 1
50% 1760 3425 1
40% 1761 3426 1
30% 1975 4043 1
Entity #3: Chains: C - Tumor necrosis factor protein, length: 157 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 5133
95% 6 15 735
90% 6 15 770
70% 7 16 754
50% 7 16 844
40% 7 16 865
30% 12 26 528
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.