Sequence Similarity Clusters for the Entities in PDB 4G1E

Entity #1 | Chains: A
Integrin alpha-V protein, length: 998 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 5441
95 % 5 11 6071 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 5 11 6059
70 % 5 11 5906
50 % 5 11 5524
40 % 5 11 5189
30 % 6 13 3718
Entity #2 | Chains: B
Integrin beta-3 protein, length: 738 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49178
95 % 6 13 4454
90 % 6 13 4480
70 % 6 13 4405
50 % 6 13 4238
40 % 8 19 1874
30 % 8 19 1814

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.