Sequence Similarity Clusters for the Entities in PDB 4G0R

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 735 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30548
95 % 1 2 25252 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 24409
70 % 1 2 22208
50 % 1 2 19246
40 % 1 2 17154
30 % 1 2 14748
Entity #2 | Chains: C
DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.