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Crystal structure of yeast DNA polymerase alpha bound to DNA/RNA and dGTP
Sequence Clustering and Redundancy Reduction Results
4FYD
Sequence Clusters for the Sequence Entities in PDB 4FYD
Entity #1: Chains: A,B - DNA polymerase alpha catalytic subunit A protein, length: 910 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 22607
95% 3 4 8096
90% 3 4 8021
70% 3 4 7679
50% 3 4 7033
40% 3 4 6487
30% 3 4 5805
Entity #2: Chains: C,D - DNA (5'-D(*TP*GP*AP*GP*CP*GP*TP*G*TP*GP*TP*AP*CP*CP*CP*CP*TP*GP*CP*CP*CP*GP*CP*CP*G)-3') dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: E,F - DNA/RNA (5'-R(*CP*GP*GP*CP*GP*GP*GP*CP*AP*G)-D(P*GP*G)-3') hybrid, length: 12 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.