Sequence Similarity Clusters for the Entities in PDB 4FXW

Entity #1 | Chains: A,C
Splicing factor U2AF 65 kDa subunit protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 7633
95 % 3 7 7712 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 7 7328
70 % 3 7 7122
50 % 3 7 6842
40 % 3 7 6108
30 % 42 240 191
Entity #2 | Chains: B,D
Splicing factor 1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41629
95 % 1 1 34981 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.6
PDBFlex
90 % 1 2 12788
70 % 1 2 12025
50 % 1 2 10723
40 % 1 2 9667
30 % 1 2 7992

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures