Sequence Similarity Clusters for the Entities in PDB 4FXW

Entity #1 | Chains: A,C
Splicing factor U2AF 65 kDa subunit protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 6808
95 % 3 7 7386 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 7 7337
70 % 3 7 7154
50 % 3 7 6591
40 % 3 7 6144
30 % 28 158 253
Entity #2 | Chains: B,D
Splicing factor 1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45988
95 % 1 1 34453 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.6
PDBFlex
90 % 1 2 12935
70 % 1 2 12170
50 % 1 2 10855
40 % 1 2 9841
30 % 1 2 8580

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures