Sequence Similarity Clusters for the Entities in PDB 4FXW

Entity #1 | Chains: A,C
Splicing factor U2AF 65 kDa subunit protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 6712
95 % 3 7 7288 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 7 7245
70 % 3 7 7072
50 % 3 7 6508
40 % 3 7 6067
30 % 28 156 250
Entity #2 | Chains: B,D
Splicing factor 1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45414
95 % 1 1 34023 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.6
PDBFlex
90 % 1 2 12778
70 % 1 2 12035
50 % 1 2 10735
40 % 1 2 9736
30 % 1 2 8483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.