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An Information Portal to 105097 Biological Macromolecular Structures

Crystal structure of yeast DNA polymerase alpha bound to DNA/RNA
Sequence Clustering and Redundancy Reduction Results
4FXD
Sequence Clusters for the Sequence Entities in PDB 4FXD
Entity #1: Chains: A,B - DNA polymerase alpha catalytic subunit A protein, length: 910 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 12135
95% 4 4 8263
90% 4 4 8180
70% 4 4 7826
50% 4 4 7164
40% 4 4 6609
30% 6 6 4354
Entity #2: Chains: C,D - DNA (5'-D(*TP*TP*TP*TP*CP*GP*CP*TP*GP*CP*CP*CP*GP*CP*CP*T)-3') dna, length: 16 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: E,F - RNA (5'-R(*AP*GP*GP*CP*GP*GP*GP*CP*AP*G)-3') rna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.