Sequence Similarity Clusters for the Entities in PDB 4FWJ

Entity #1 | Chains: A,B
Lysine-specific histone demethylase 1B protein, length: 796 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 4384
95 % 8 10 4451 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 8 10 4488
70 % 8 10 4399
50 % 8 10 4220
40 % 8 10 4030
30 % 8 10 3736

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures