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An Information Portal to 105212 Biological Macromolecular Structures

Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic
Sequence Clustering and Redundancy Reduction Results
4FWF
Sequence Clusters for the Sequence Entities in PDB 4FWF
Entity #1: Chains: A - Lysine-specific histone demethylase 1B protein, length: 796 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 9 3002
95% 7 10 3142
90% 7 10 3175
70% 7 10 3159
50% 7 10 3117
40% 7 10 3016
30% 7 10 2806
Entity #2: Chains: E - Histone H3.1 protein, length: 20 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 18657
95% 15 25 789
90% 15 25 822
70% 15 25 866
50% 15 25 929
40% 15 25 957
30% 15 25 935
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.