Sequence Similarity Clusters for the Entities in PDB 4FWF

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 796 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 3440
95 % 7 10 3597
90 % 7 10 3628
70 % 7 10 3581
50 % 7 10 3458
40 % 7 10 3333
30 % 7 10 3100
Entity #2 | Chains: E
Histone H3.1 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20958
95 % 15 25 920
90 % 15 25 948
70 % 15 25 994
50 % 15 25 1033
40 % 15 25 1057
30 % 15 25 1036

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.