Sequence Similarity Clusters for the Entities in PDB 4FQ2

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27644
95 % 1 3 23077 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 9 48 397
70 % 354 2342 2
50 % 727 4843 1
40 % 727 4843 1
30 % 788 5705 1
Entity #2 | Chains: L
Fab light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28216
95 % 1 11 4498 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 2 29 1408
70 % 355 2392 1
50 % 728 4843 1
40 % 728 4843 1
30 % 789 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures