Sequence Similarity Clusters for the Entities in PDB 4FQ2

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15821
95 % 1 4 14809 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 9 50 397
70 % 379 2429 2
50 % 778 5021 1
40 % 778 5021 1
30 % 876 5951 1
Entity #2 | Chains: L
Fab light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15995
95 % 1 13 3689 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 2 32 1221
70 % 380 2479 1
50 % 779 5021 1
40 % 779 5021 1
30 % 877 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures