Sequence Similarity Clusters for the Entities in PDB 4FQ1

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26183
95 % 3 3 21867 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 6.3
PDBFlex
90 % 4 4 13503
70 % 1671 2172 1
50 % 3460 4489 1
40 % 3460 4489 1
30 % 4077 5290 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39716
95 % 3 3 22334 Flexibility: Medium
Max RMSD: 9.8, Avg RMSD: 6.9
PDBFlex
90 % 8 26 1460
70 % 281 394 9
50 % 3461 4489 1
40 % 3461 4489 1
30 % 4078 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.