Sequence Similarity Clusters for the Entities in PDB 4FQ1

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27564
95 % 3 3 23009 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 6.5
PDBFlex
90 % 4 5 12194
70 % 1776 2334 2
50 % 3685 4827 1
40 % 3685 4827 1
30 % 4354 5688 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41702
95 % 3 3 23491
90 % 8 29 1402
70 % 1819 2385 1
50 % 3686 4827 1
40 % 3686 4827 1
30 % 4355 5688 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures