Sequence Similarity Clusters for the Entities in PDB 4FQ1

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27394
95 % 3 3 24053 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 6.3
PDBFlex
90 % 4 5 12527
70 % 1911 2532 2
50 % 3958 5226 1
40 % 4470 5890 1
30 % 5569 7330 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27047
95 % 3 3 23797 Flexibility: Medium
Max RMSD: 9.8, Avg RMSD: 6.9
PDBFlex
90 % 9 35 1121
70 % 1947 2576 1
50 % 3959 5226 1
40 % 4471 5890 1
30 % 5570 7330 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures