Sequence Similarity Clusters for the Entities in PDB 4FQ1

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27224
95 % 3 3 22737 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 6.5
PDBFlex
90 % 4 5 12072
70 % 1730 2280 2
50 % 3587 4713 1
40 % 3587 4713 1
30 % 4249 5567 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41185
95 % 3 3 23211
90 % 8 29 1389
70 % 1769 2327 1
50 % 3588 4713 1
40 % 3588 4713 1
30 % 4250 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.