Sequence Similarity Clusters for the Entities in PDB 4FOJ

Entity #1 | Chains: A
FimX protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 20466
95 % 1 5 14309 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.2
PDBFlex
90 % 1 5 14048
70 % 1 5 13143
50 % 1 5 11665
40 % 1 5 10462
30 % 4 33 1187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q6J 1 A, B Lmo0131 protein 1639
2 3S83 1 A GGDEF family protein EAL domain residues 289-547 155892
3 3HV8 1 A Protein FimX EAL domain: UNP residues 429-691 287 3.1.4.52 | Details
4 4FOJ 1 A FimX EAL domain (UNP residues 426-689) 346
5 4Y9M 1 A PA3825-EAL UNP residues 255-517 287
6 4Y8E 1 A, B PA3825 EAL 287
7 4KIE 1 A Cyclic di-GMP phosphodiesterase YahA EAL domain containing residues 96-372 562 3.1.4.52 | Details
8 4HJF 1 A GGDEF family protein 155892
9 4FOK 1 A FimX EAL domain (UNP residues 426-689) 346
10 4Y9O 1 A PA3825-EAL 287
11 2R6O 1 A, B Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) Residues 487-758 36861
12 5MF5 1 A Diguanylate phosphodiesterase 287
13 4LJ3 1 A, B Cyclic di-GMP phosphodiesterase YahA EAL domain containing residues 101-362 562 3.1.4.52 | Details
14 4Y9N 1 A PA3825-EAL 287
15 4AFY 1 A, B FIMX EAL DOMAIN, RESIDUES 439-691 287 3.1.4.52 | Details
16 4FOU 1 A, B FimX EAL domain (UNP residues 426-689) 346
17 4RNI 1 A, B Motility regulator EAL domain, UNP residues 1145-1409 287 3.1.4.52 | Details
18 5MFU 1 A Diguanylate phosphodiesterase 287
19 5M1T 1 A, B MucR Phosphodiesterase 287
20 3U2E 1 A, B GGDEF family protein 155892
21 3N3T 1 A, B PUTATIVE DIGUANYLATE CYCLASE/PHOSPHODIESTERASE 36861
22 3HV9 1 A Protein FimX EAL domain: UNP residues 429-691 287 3.1.4.52 | Details
23 4RNJ 1 A, B Motility regulator EAL domain, UNP residues 1145-1409 287 3.1.4.52 | Details
24 4LYK 1 A, B, C, D Cyclic di-GMP phosphodiesterase YahA EAL domain containing residues 101-362 562 3.1.4.52 | Details
25 4AG0 1 A, B FIMX EAL DOMAIN, RESIDUES 439-691 287 3.1.4.52 | Details
26 4Y9P 1 A, B PA3825-EAL UNP residues 255-517 287
27 4HU4 1 A, B Oxygen sensor protein DosP EAL domain, UNP residues 529-799 562 3.1.4.52 | Details
28 5MKG 1 A Diguanylate phosphodiesterase 287
29 5MKG 2 B Diguanylate phosphodiesterase 287
30 4F3H 1 A Putative uncharacterized protein UNP residues 437-684 339
31 4F48 1 A Putative uncharacterized protein UNP residues 437-684 339
32 5YRP 1 A, B Sensory box/response regulator EAL domain 1772
33 4HU3 1 A Oxygen sensor protein DosP EAL domain, UNP residues 529-799 562 3.1.4.52 | Details