Sequence Similarity Clusters for the Entities in PDB 4FNU

Entity #1 | Chains: A,B,C,D
Alpha-galactosidase AgaA protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16765
95 % 6 6 2930 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 6 6 2969
70 % 6 6 2933
50 % 6 6 2894
40 % 12 12 1707
30 % 12 12 1671

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures