Sequence Similarity Clusters for the Entities in PDB 4FNT

Entity #1 | Chains: A,B,C,D
Alpha-galactosidase AgaA protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 2892
95 % 2 6 3032 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 6 3081
70 % 2 6 3099
50 % 2 6 3054
40 % 7 12 1779
30 % 7 12 1749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures