Sequence Similarity Clusters for the Entities in PDB 4FNT

Entity #1 | Chains: A,B,C,D
Alpha-galactosidase AgaA protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16570
95 % 2 6 2908 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 6 2952
70 % 2 6 2915
50 % 2 6 2870
40 % 7 12 1688
30 % 7 12 1651

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures