Sequence Similarity Clusters for the Entities in PDB 4FNR

Entity #1 | Chains: A,B,C,D
Alpha-galactosidase AgaA protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17183
95 % 5 6 3002 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 5 6 3043
70 % 5 6 3004
50 % 5 6 2959
40 % 11 12 1751
30 % 11 12 1711

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures