Sequence Similarity Clusters for the Entities in PDB 4FNQ

Entity #1 | Chains: A
Alpha-galactosidase AgaB protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49110
95 % 1 6 3082 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 6 3135
70 % 1 6 3139
50 % 1 6 3083
40 % 4 12 1807
30 % 4 12 1769

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures