Sequence Similarity Clusters for the Entities in PDB 4FNQ

Entity #1 | Chains: A
Alpha-galactosidase AgaB protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61260
95 % 1 6 3132 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 6 3182
70 % 1 6 3200
50 % 1 6 3139
40 % 4 12 1847
30 % 4 12 1806

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures