Sequence Similarity Clusters for the Entities in PDB 4FNQ

Entity #1 | Chains: A
Alpha-galactosidase AgaB protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63746
95 % 1 6 3299 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 6 3359
70 % 1 6 3374
50 % 1 6 3274
40 % 4 12 1928
30 % 4 12 1874

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures