Sequence Similarity Clusters for the Entities in PDB 4FNC

Entity #1 | Chains: A
G/T mismatch-specific thymine DNA glycosylase protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 5242
95 % 8 13 3816 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 8 13 3865
70 % 8 13 3807
50 % 8 13 3704
40 % 8 13 3565
30 % 8 13 3335
Entity #2 | Chains: C
DNA (28-MER) dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
DNA (29-MER) dna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures