Sequence Similarity Clusters for the Entities in PDB 4FNC

Entity #1 | Chains: A
G/T mismatch-specific thymine DNA glycosylase protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 10 4687
95 % 8 13 3503
90 % 8 13 3547
70 % 8 13 3489
50 % 8 13 3412
40 % 8 13 3303
30 % 8 13 3088
Entity #2 | Chains: C
DNA (28-MER) dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
DNA (29-MER) dna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.