Sequence Similarity Clusters for the Entities in PDB 4FIR

Entity #1 | Chains: A,B,C,D,E,F
Pyridoxal biosynthesis lyase pdxS protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5717
95 % 2 2 5965 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 2 2 5968
70 % 3 3 4568
50 % 27 29 431
40 % 27 29 465
30 % 27 29 473

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures