Sequence Similarity Clusters for the Entities in PDB 4FGN

Entity #1 | Chains: A,B
Large T antigen protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 2592
95 % 11 14 2875 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 11 14 2922
70 % 15 18 2274
50 % 15 18 2252
40 % 15 18 2238
30 % 15 18 2143
Entity #2 | Chains: Z
Site I DNA dna, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Y
Site I DNA dna, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.