Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 2659
95 % 8 8 3353
90 % 8 8 3398
70 % 107 108 113
50 % 108 109 139
40 % 108 109 152
30 % 110 111 168
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36220
95 % 2 2 16291
90 % 110 136 136
70 % 1467 1609 3
50 % 3552 3902 1
40 % 3553 3903 1
30 % 4233 4631 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18456
95 % 2 2 16161
90 % 2 2 15788
70 % 1724 1894 1
50 % 3553 3902 1
40 % 3554 3903 1
30 % 4234 4631 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.