Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 3047
95 % 8 8 3790
90 % 8 8 3831
70 % 114 115 112
50 % 115 116 145
40 % 115 116 162
30 % 118 119 175
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40688
95 % 2 2 18345
90 % 117 145 141
70 % 2032 2280 1
50 % 4121 4619 1
40 % 4121 4619 1
30 % 4887 5440 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20895
95 % 2 2 18197
90 % 2 2 17767
70 % 1996 2238 2
50 % 4122 4619 1
40 % 4122 4619 1
30 % 4888 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.