Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 2847
95 % 8 8 3570
90 % 8 8 3609
70 % 113 114 101
50 % 114 115 136
40 % 114 115 151
30 % 116 117 165
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38161
95 % 2 2 17133
90 % 114 140 139
70 % 1568 1726 2
50 % 3807 4210 1
40 % 3808 4211 1
30 % 4509 4962 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19494
95 % 2 2 16998
90 % 2 2 16614
70 % 1841 2036 1
50 % 3808 4210 1
40 % 3809 4211 1
30 % 4510 4962 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.