Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 2684
95 % 8 8 3381
90 % 8 8 3425
70 % 108 109 100
50 % 109 110 135
40 % 109 110 150
30 % 111 112 165
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36550
95 % 2 2 16432
90 % 111 137 137
70 % 1475 1620 3
50 % 3580 3940 1
40 % 3581 3941 1
30 % 4261 4669 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18639
95 % 2 2 16301
90 % 2 2 15928
70 % 1737 1912 1
50 % 3581 3940 1
40 % 3582 3941 1
30 % 4262 4669 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.