Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 2919
95 % 8 8 3653
90 % 8 8 3694
70 % 114 115 105
50 % 115 116 142
40 % 115 116 156
30 % 117 118 169
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39177
95 % 2 2 17589
90 % 117 144 139
70 % 1610 1775 2
50 % 3943 4367 1
40 % 3943 4367 1
30 % 4676 5151 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20026
95 % 2 2 17448
90 % 2 2 17050
70 % 1906 2111 1
50 % 3944 4367 1
40 % 3944 4367 1
30 % 4677 5151 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.