Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 2741
95 % 8 8 3437
90 % 8 8 3483
70 % 109 110 102
50 % 110 111 137
40 % 110 111 153
30 % 112 113 167
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37173
95 % 2 2 16702
90 % 114 140 136
70 % 1503 1653 3
50 % 3649 4026 1
40 % 3651 4028 1
30 % 4339 4764 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18977
95 % 2 2 16570
90 % 2 2 16194
70 % 1769 1952 1
50 % 3650 4026 1
40 % 3652 4028 1
30 % 4340 4764 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.