Sequence Similarity Clusters for the Entities in PDB 4FFW

Entity #1 | Chains: A,B
Dipeptidyl peptidase 4 protein, length: 730 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 2713
95 % 8 8 3399
90 % 8 8 3443
70 % 108 109 103
50 % 109 110 138
40 % 109 110 154
30 % 111 112 167
Entity #2 | Chains: C,L
Fab light chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36780
95 % 2 2 16540
90 % 114 140 135
70 % 1489 1639 3
50 % 3612 3985 1
40 % 3613 3986 1
30 % 4294 4715 1
Entity #3 | Chains: D,H
Fab heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18771
95 % 2 2 16409
90 % 2 2 16036
70 % 1751 1932 1
50 % 3613 3985 1
40 % 3614 3986 1
30 % 4295 4715 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.