Sequence Similarity Clusters for the Entities in PDB 4FA5

Entity #1 | Chains: A,B
Methylamine utilization protein MauG protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1414
95 % 9 28 929 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 9 28 961
70 % 9 28 991
50 % 9 28 1035
40 % 9 28 1054
30 % 9 28 1036
Entity #2 | Chains: C,E
Methylamine dehydrogenase light chain protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 37 399
95 % 10 40 524 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 10 40 553
70 % 10 41 569
50 % 10 41 608
40 % 33 68 393
30 % 33 68 399
Entity #3 | Chains: D,F
Methylamine dehydrogenase heavy chain protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 34 455
95 % 10 37 548 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 10 37 576
70 % 10 38 588
50 % 10 38 629
40 % 10 42 630
30 % 10 42 614

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures