Sequence Similarity Clusters for the Entities in PDB 4FA5

Entity #1 | Chains: A,B
Methylamine utilization protein MauG protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 23 994
95 % 9 28 964 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 9 28 991
70 % 9 28 1026
50 % 9 28 1073
40 % 9 28 1082
30 % 9 28 1079
Entity #2 | Chains: C,E
Methylamine dehydrogenase light chain protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 37 440
95 % 10 40 533 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 10 40 562
70 % 10 41 584
50 % 10 41 622
40 % 33 68 419
30 % 33 68 417
Entity #3 | Chains: D,F
Methylamine dehydrogenase heavy chain protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 34 527
95 % 10 37 570 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 10 37 600
70 % 10 37 643
50 % 10 37 687
40 % 10 41 664
30 % 10 41 662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures