Sequence Similarity Clusters for the Entities in PDB 4FA5

Entity #1 | Chains: A,B
Methylamine utilization protein MauG protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1391
95 % 9 28 909 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 9 28 943
70 % 9 28 975
50 % 9 28 1020
40 % 9 28 1043
30 % 9 28 1022
Entity #2 | Chains: C,E
Methylamine dehydrogenase light chain protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 37 393
95 % 10 40 522 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 10 40 548
70 % 10 41 564
50 % 10 41 605
40 % 33 68 387
30 % 33 68 389
Entity #3 | Chains: D,F
Methylamine dehydrogenase heavy chain protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 34 449
95 % 10 37 540 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 10 37 567
70 % 10 38 582
50 % 10 38 623
40 % 10 42 623
30 % 10 42 608

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures