Sequence Similarity Clusters for the Entities in PDB 4FA5

Entity #1 | Chains: A,B
Methylamine utilization protein MauG protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1345
95 % 9 28 882 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 9 28 916
70 % 9 28 948
50 % 9 28 994
40 % 9 28 1016
30 % 9 28 993
Entity #2 | Chains: C,E
Methylamine dehydrogenase light chain protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 37 362
95 % 10 40 485 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 10 40 519
70 % 10 41 543
50 % 10 41 588
40 % 33 68 353
30 % 33 68 361
Entity #3 | Chains: D,F
Methylamine dehydrogenase heavy chain protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 34 438
95 % 10 37 512 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 10 37 542
70 % 10 38 562
50 % 10 38 608
40 % 10 42 605
30 % 10 42 599

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.