Sequence Similarity Clusters for the Entities in PDB 4F7U

Entity #1 | Chains: A,C
Small nuclear ribonucleoprotein Sm D1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 764
95 % 1 8 1059
90 % 1 8 1081
70 % 1 9 1075
50 % 1 9 1119
40 % 1 9 1137
30 % 1 17 867
Entity #2 | Chains: B,D
Small nuclear ribonucleoprotein Sm D2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 681
95 % 1 9 958
90 % 1 9 981
70 % 1 9 1033
50 % 1 17 798
40 % 1 17 827
30 % 1 17 820
Entity #3 | Chains: E,H
Small nuclear ribonucleoprotein E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 701
95 % 1 8 987
90 % 1 8 1011
70 % 1 8 1058
50 % 1 8 1097
40 % 1 8 1115
30 % 1 8 1099
Entity #4 | Chains: F,I
Small nuclear ribonucleoprotein F protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 781
95 % 1 7 1080
90 % 1 7 1104
70 % 1 7 1148
50 % 1 7 1194
40 % 1 7 1208
30 % 1 7 1188
Entity #5 | Chains: G,J
Small nuclear ribonucleoprotein G protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 703
95 % 1 8 990
90 % 1 8 1014
70 % 1 8 1061
50 % 1 16 840
40 % 1 17 829
30 % 1 17 823
Entity #6 | Chains: P,Q
ICLn protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41006
95 % 1 1 30763
90 % 1 1 29473
70 % 1 1 26432
50 % 1 1 22668
40 % 1 1 19947
30 % 1 1 16877

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.