Sequence Similarity Clusters for the Entities in PDB 4F7U

Entity #1 | Chains: A,C
Small nuclear ribonucleoprotein Sm D1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 735
95 % 1 8 1005
90 % 1 8 1030
70 % 1 9 1026
50 % 1 9 1071
40 % 1 9 1099
30 % 1 13 952
Entity #2 | Chains: B,D
Small nuclear ribonucleoprotein Sm D2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 638
95 % 1 9 903
90 % 1 9 932
70 % 1 9 981
50 % 1 14 856
40 % 1 14 885
30 % 1 14 877
Entity #3 | Chains: E,H
Small nuclear ribonucleoprotein E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 663
95 % 1 8 936
90 % 1 8 963
70 % 1 8 1010
50 % 1 8 1049
40 % 1 8 1076
30 % 1 8 1051
Entity #4 | Chains: F,I
Small nuclear ribonucleoprotein F protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 749
95 % 1 7 1033
90 % 1 7 1057
70 % 1 7 1098
50 % 1 7 1148
40 % 1 7 1172
30 % 1 7 1144
Entity #5 | Chains: G,J
Small nuclear ribonucleoprotein G protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 665
95 % 1 8 939
90 % 1 8 966
70 % 1 8 1013
50 % 1 12 907
40 % 1 13 901
30 % 1 13 893
Entity #6 | Chains: P,Q
ICLn protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39532
95 % 1 1 29695
90 % 1 1 28462
70 % 1 1 25514
50 % 1 1 21924
40 % 1 1 19335
30 % 1 1 16366

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.