Sequence Similarity Clusters for the Entities in PDB 4F7U

Entity #1 | Chains: A,C
Small nuclear ribonucleoprotein Sm D1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 764
95 % 1 7 1053
90 % 1 7 1069
70 % 1 8 1049
50 % 1 8 1103
40 % 1 8 1120
30 % 1 11 998
Entity #2 | Chains: B,D
Small nuclear ribonucleoprotein Sm D2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 662
95 % 1 8 934
90 % 1 8 963
70 % 1 8 1004
50 % 1 12 911
40 % 1 12 940
30 % 1 12 929
Entity #3 | Chains: E,H
Small nuclear ribonucleoprotein E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 693
95 % 1 7 964
90 % 1 7 987
70 % 1 7 1025
50 % 1 7 1077
40 % 1 7 1102
30 % 1 7 1078
Entity #4 | Chains: F,I
Small nuclear ribonucleoprotein F protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 780
95 % 1 6 1080
90 % 1 6 1096
70 % 1 6 1125
50 % 1 6 1186
40 % 1 6 1208
30 % 1 6 1182
Entity #5 | Chains: G,J
Small nuclear ribonucleoprotein G protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 696
95 % 1 7 966
90 % 1 7 988
70 % 1 7 1026
50 % 1 10 972
40 % 1 11 959
30 % 1 11 947
Entity #6 | Chains: P,Q
ICLn protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38672
95 % 1 1 29069
90 % 1 1 27864
70 % 1 1 24985
50 % 1 1 21476
40 % 1 1 18954
30 % 1 1 16056

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.