Sequence Similarity Clusters for the Entities in PDB 4F7U

Entity #1 | Chains: A,C
Small nuclear ribonucleoprotein Sm D1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 752
95 % 1 8 1027
90 % 1 8 1050
70 % 1 9 1044
50 % 1 9 1090
40 % 1 9 1113
30 % 1 13 970
Entity #2 | Chains: B,D
Small nuclear ribonucleoprotein Sm D2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 666
95 % 1 9 934
90 % 1 9 957
70 % 1 9 1001
50 % 1 14 876
40 % 1 14 901
30 % 1 14 894
Entity #3 | Chains: E,H
Small nuclear ribonucleoprotein E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 688
95 % 1 8 963
90 % 1 8 985
70 % 1 8 1028
50 % 1 8 1067
40 % 1 8 1091
30 % 1 8 1069
Entity #4 | Chains: F,I
Small nuclear ribonucleoprotein F protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 766
95 % 1 7 1052
90 % 1 7 1075
70 % 1 7 1117
50 % 1 7 1165
40 % 1 7 1185
30 % 1 7 1161
Entity #5 | Chains: G,J
Small nuclear ribonucleoprotein G protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 690
95 % 1 8 966
90 % 1 8 988
70 % 1 8 1031
50 % 1 12 928
40 % 1 13 916
30 % 1 13 909
Entity #6 | Chains: P,Q
ICLn protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40064
95 % 1 1 30082
90 % 1 1 28820
70 % 1 1 25824
50 % 1 1 22184
40 % 1 1 19554
30 % 1 1 16549

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.