Sequence Similarity Clusters for the Entities in PDB 4F7U

Entity #1 | Chains: A,C
Small nuclear ribonucleoprotein Sm D1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 784
95 % 1 9 1077
90 % 1 9 1099
70 % 1 10 1095
50 % 1 10 1135
40 % 1 10 1144
30 % 1 22 819
Entity #2 | Chains: B,D
Small nuclear ribonucleoprotein Sm D2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 713
95 % 1 10 991
90 % 1 10 1012
70 % 1 10 1045
50 % 1 22 758
40 % 1 22 794
30 % 1 22 785
Entity #3 | Chains: E,H
Small nuclear ribonucleoprotein E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 724
95 % 1 9 1008
90 % 1 9 1029
70 % 1 9 1066
50 % 1 9 1105
40 % 1 9 1119
30 % 1 9 1100
Entity #4 | Chains: F,I
Small nuclear ribonucleoprotein F protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 804
95 % 1 8 1103
90 % 1 8 1126
70 % 1 8 1161
50 % 1 8 1211
40 % 1 8 1225
30 % 1 8 1200
Entity #5 | Chains: G,J
Small nuclear ribonucleoprotein G protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 725
95 % 1 9 1010
90 % 1 9 1031
70 % 1 9 1068
50 % 1 21 790
40 % 1 22 797
30 % 1 22 787
Entity #6 | Chains: P,Q
ICLn protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43175
95 % 1 1 32392
90 % 1 1 31013
70 % 1 1 27756
50 % 1 1 23777
40 % 1 1 20916
30 % 1 1 17704

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.