Sequence Similarity Clusters for the Entities in PDB 4F7T

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 29 972
95 % 2 29 1180 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 55 310 36
70 % 121 740 6
50 % 124 754 7
40 % 125 806 9
30 % 134 930 12
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 125 666 2
95 % 130 681 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 130 690 4
70 % 148 944 4
50 % 152 966 3
40 % 152 966 6
30 % 152 966 9
Entity #3 | Chains: C,F
RNA-directed RNA polymerase catalytic subunit protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures