Sequence Similarity Clusters for the Entities in PDB 4F7T

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 24 974
95 % 2 24 1333 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 50 290 36
70 % 107 684 6
50 % 107 689 6
40 % 111 739 10
30 % 118 856 15
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 102 593 2
95 % 118 636 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 118 645 4
70 % 132 875 4
50 % 136 897 4
40 % 136 897 9
30 % 136 897 14
Entity #3 | Chains: C,F
RNA-directed RNA polymerase catalytic subunit protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.