Sequence Similarity Clusters for the Entities in PDB 4F7M

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 24 1000
95 % 20 24 1358 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 234 302 35
70 % 536 716 6
50 % 537 721 6
40 % 575 772 10
30 % 627 896 15
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 472 616 2
95 % 506 660 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 512 669 4
70 % 656 912 4
50 % 668 934 3
40 % 668 934 7
30 % 668 934 12
Entity #3 | Chains: C,F
PA polymerase subunit protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.