Sequence Similarity Clusters for the Entities in PDB 4F7M

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 29 972
95 % 22 29 1180 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 237 310 36
70 % 553 740 6
50 % 562 754 7
40 % 594 806 9
30 % 650 930 12
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 507 666 2
95 % 518 681 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 524 690 4
70 % 676 944 4
50 % 688 966 3
40 % 688 966 6
30 % 688 966 9
Entity #3 | Chains: C,F
PA polymerase subunit protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures