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An Information Portal to 105025 Biological Macromolecular Structures

Crystal Structure of HLA-A*2402 Complexed with a Newly Identified Peptide from 2009 H1N1 PA (649-658)
Sequence Clustering and Redundancy Reduction Results
4F7M
Sequence Clusters for the Sequence Entities in PDB 4F7M
Entity #1: Chains: A,D - HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 17 1345
95% 14 17 1809
90% 173 224 21
70% 394 532 7
50% 395 537 7
40% 420 565 10
30% 424 587 15
Entity #2: Chains: B,E - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 338 451 2
95% 357 480 3
90% 362 488 3
70% 482 689 5
50% 491 703 5
40% 491 703 6
30% 491 703 11
Entity #3: Chains: C,F - PA polymerase subunit protein, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.