Sequence Similarity Clusters for the Entities in PDB 4F7E

Entity #1 | Chains: A
CD1D antigen, d polypeptide protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26718
95 % 1 2 22408 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 21768
70 % 1 2 19966
50 % 41 97 422
40 % 41 97 451
30 % 581 896 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 5854
95 % 4 6 6510 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 4 6 6488
70 % 608 912 4
50 % 620 934 3
40 % 620 934 7
30 % 620 934 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.