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Crystal structure of bovine CD1d with bound C16:0-alpha-galactosyl ceramide
Sequence Clustering and Redundancy Reduction Results
4F7E
Sequence Clusters for the Sequence Entities in PDB 4F7E
Entity #1: Chains: A - CD1D antigen, d polypeptide protein, length: 283 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 20970
95% 1 2 17704
90% 1 2 17253
70% 1 2 16014
50% 30 77 364
40% 30 77 389
30% 448 702 13
Entity #2: Chains: B - Beta-2-microglobulin protein, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 4450
95% 4 6 5093
90% 4 6 5102
70% 471 722 5
50% 480 740 5
40% 480 740 8
30% 480 740 11
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.