Sequence Similarity Clusters for the Entities in PDB 4F7E

Entity #1 | Chains: A
CD1D antigen, d polypeptide protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27477
95 % 1 2 24091 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 23297
70 % 1 2 21171
50 % 41 97 437
40 % 41 97 461
30 % 591 910 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 6180
95 % 4 6 6342 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 4 6 6323
70 % 613 922 4
50 % 625 944 3
40 % 625 944 6
30 % 625 944 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures