Sequence Similarity Clusters for the Entities in PDB 4F7C

Entity #1 | Chains: A,C
CD1D antigen, d polypeptide protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28391
95 % 2 2 24846 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 24002
70 % 2 2 21806
50 % 79 104 408
40 % 79 104 433
30 % 823 939 13
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 6393
95 % 6 6 6543 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 6 6 6531
70 % 842 953 4
50 % 857 975 3
40 % 857 975 6
30 % 857 975 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures