Sequence Similarity Clusters for the Entities in PDB 4F7C

Entity #1 | Chains: A,C
CD1D antigen, d polypeptide protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26069
95 % 2 2 21851 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 21234
70 % 2 2 19553
50 % 68 91 431
40 % 68 91 459
30 % 753 856 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5715
95 % 6 6 6359 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 6 6341
70 % 778 875 4
50 % 793 897 4
40 % 793 897 9
30 % 793 897 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.