Sequence Similarity Clusters for the Entities in PDB 4F7C

Entity #1 | Chains: A,C
CD1D antigen, d polypeptide protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26815
95 % 2 2 22489 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 21845
70 % 2 2 20051
50 % 74 97 422
40 % 74 97 450
30 % 789 897 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5882
95 % 6 6 6535 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 6 6 6515
70 % 811 914 4
50 % 826 936 3
40 % 826 936 7
30 % 826 936 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.