Sequence Similarity Clusters for the Entities in PDB 4F7C

Entity #1 | Chains: A,C
CD1D antigen, d polypeptide protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25646
95 % 2 2 21512 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 20916
70 % 2 2 19290
50 % 68 91 414
40 % 68 91 450
30 % 748 851 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5577
95 % 6 6 6213 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 6 6195
70 % 773 870 4
50 % 788 892 4
40 % 788 892 8
30 % 788 892 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.