Sequence Similarity Clusters for the Entities in PDB 4F58

Entity #1 | Chains: L,M,N,O
Light chain of Fab of a neutralizing antibody L3 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21880
95 % 2 2 14746 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 43 89 233
70 % 1248 2426 1
50 % 2550 4913 1
40 % 2550 4913 1
30 % 2910 5780 1
Entity #2 | Chains: H,I,J,K
Heavy chain of Fab of a neutralizing antibody L3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15645
95 % 2 2 14647 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 2 14406
70 % 1237 2376 2
50 % 2551 4913 1
40 % 2551 4913 1
30 % 2911 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures