Sequence Similarity Clusters for the Entities in PDB 4F58

Entity #1 | Chains: L,M,N,O
Light chain of Fab of a neutralizing antibody L3 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21350
95 % 2 2 14450 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 37 80 247
70 % 1186 2329 1
50 % 2425 4717 1
40 % 2425 4717 1
30 % 2775 5571 1
Entity #2 | Chains: H,I,J,K
Heavy chain of Fab of a neutralizing antibody L3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15277
95 % 2 2 14352 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 2 14110
70 % 1177 2282 2
50 % 2426 4717 1
40 % 2426 4717 1
30 % 2776 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.