Sequence Similarity Clusters for the Entities in PDB 4F57

Entity #1 | Chains: L
Light chain of Fab of a neutralizing antibody L1 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60369
95 % 1 2 14307 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 3 75 259
70 % 149 2287 1
50 % 311 4633 1
40 % 311 4633 1
30 % 332 5460 1
Entity #2 | Chains: H
Heavy chain of Fab of a neutralizing antibody L1 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15110
95 % 1 2 14207 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 13969
70 % 152 2244 2
50 % 312 4633 1
40 % 312 4633 1
30 % 333 5460 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.