Sequence Similarity Clusters for the Entities in PDB 4F57

Entity #1 | Chains: L
Light chain of Fab of a neutralizing antibody L1 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16622
95 % 1 2 14709 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 86 246
70 % 171 2516 1
50 % 356 5101 1
40 % 449 5750 1
30 % 540 7168 1
Entity #2 | Chains: H
Heavy chain of Fab of a neutralizing antibody L1 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16619
95 % 1 2 15428
90 % 1 2 15102
70 % 173 2475 2
50 % 357 5101 1
40 % 450 5750 1
30 % 541 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures