Sequence Similarity Clusters for the Entities in PDB 4F57

Entity #1 | Chains: L
Light chain of Fab of a neutralizing antibody L1 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59593
95 % 1 2 14101 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 72 262
70 % 148 2264 1
50 % 309 4587 1
40 % 309 4587 1
30 % 330 5392 1
Entity #2 | Chains: H
Heavy chain of Fab of a neutralizing antibody L1 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14895
95 % 1 2 14001 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 13758
70 % 151 2222 2
50 % 310 4587 1
40 % 310 4587 1
30 % 331 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.