Sequence Similarity Clusters for the Entities in PDB 4F57

Entity #1 | Chains: L
Light chain of Fab of a neutralizing antibody L1 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61230
95 % 1 2 14508 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 5 86 241
70 % 156 2362 1
50 % 325 4781 1
40 % 325 4781 1
30 % 346 5635 1
Entity #2 | Chains: H
Heavy chain of Fab of a neutralizing antibody L1 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15346
95 % 1 2 14410
90 % 1 2 14169
70 % 158 2311 2
50 % 326 4781 1
40 % 326 4781 1
30 % 347 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures