Sequence Similarity Clusters for the Entities in PDB 4F4K

Entity #1 | Chains: A,D
DNA polymerase protein, length: 592 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 21 922
95 % 7 95 311
90 % 7 95 325
70 % 7 95 373
50 % 7 95 432
40 % 7 95 452
30 % 7 95 451
Entity #2 | Chains: B,E
DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DDG))-3') dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
DNA (5'-D(*CP*AP*TP*TP*CP*GP*AP*GP*TP*CP*AP*GP*G)-3') dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures