Sequence Similarity Clusters for the Entities in PDB 4F48

Entity #1 | Chains: A
Putative uncharacterized protein protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38552
95 % 5 5 12105 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.2
PDBFlex
90 % 5 5 11937
70 % 5 5 11277
50 % 5 5 10097
40 % 5 5 9171
30 % 5 5 8011
Entity #2 | Chains: B
Type IV fimbriae assembly protein protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67966
95 % 3 3 14881 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 3 14608
70 % 3 3 13678
50 % 3 3 12148
40 % 3 3 11018
30 % 3 3 9565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.