Sequence Similarity Clusters for the Entities in PDB 4F48

Entity #1 | Chains: A
Putative uncharacterized protein protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37173
95 % 5 5 11633 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.2
PDBFlex
90 % 5 5 11470
70 % 5 5 10831
50 % 5 5 9732
40 % 5 5 8838
30 % 5 5 7711
Entity #2 | Chains: B
Type IV fimbriae assembly protein protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65621
95 % 3 3 14320 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 3 14053
70 % 3 3 13167
50 % 3 3 11725
40 % 3 3 10631
30 % 3 3 9212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.