Sequence Similarity Clusters for the Entities in PDB 4F48

Entity #1 | Chains: A
Putative uncharacterized protein protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 45581
95 % 5 5 14158 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.2
PDBFlex
90 % 5 5 13901
70 % 5 5 13004
50 % 5 5 11546
40 % 5 5 10364
30 % 31 33 1175
Entity #2 | Chains: B
Type IV fimbriae assembly protein protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16745
95 % 3 3 15546 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 3 15216
70 % 3 3 14243
50 % 3 3 12664
40 % 3 3 11365
30 % 3 3 9649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures