Sequence Similarity Clusters for the Entities in PDB 4F48

Entity #1 | Chains: A
Putative uncharacterized protein protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39122
95 % 5 5 12270 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.2
PDBFlex
90 % 5 5 12101
70 % 5 5 11436
50 % 5 5 10243
40 % 5 5 9300
30 % 5 5 8126
Entity #2 | Chains: B
Type IV fimbriae assembly protein protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68877
95 % 3 3 15093 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 3 14824
70 % 3 3 13891
50 % 3 3 12334
40 % 3 3 11179
30 % 3 3 9706

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures