Sequence Similarity Clusters for the Entities in PDB 4F48

Entity #1 | Chains: A
Putative uncharacterized protein protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39892
95 % 5 5 12548 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.2
PDBFlex
90 % 5 5 12370
70 % 5 5 11677
50 % 5 5 10448
40 % 5 5 9482
30 % 5 5 8283
Entity #2 | Chains: B
Type IV fimbriae assembly protein protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70128
95 % 3 3 15410 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 3 15126
70 % 3 3 14162
50 % 3 3 12557
40 % 3 3 11375
30 % 3 3 9875

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures