Sequence Similarity Clusters for the Entities in PDB 4F3T

Entity #1 | Chains: A
Protein argonaute-2 protein, length: 861 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49512
95 % 5 19 3194 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 5 19 3238
70 % 8 23 2624
50 % 8 23 2590
40 % 8 23 2544
30 % 8 23 2408
Entity #2 | Chains: R
RNA (5'-R(P*UP*AP*AP*AP*GP*UP*GP*CP*UP*UP*AP*UP*AP*GP*UP*G*CP*AP*GP*G)-3') rna, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.