Sequence Similarity Clusters for the Entities in PDB 4F2R

Entity #1 | Chains: A,D
DNA polymerase protein, length: 592 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 32 868
95 % 11 100 326 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 11 100 336
70 % 11 100 382
50 % 11 100 454
40 % 11 100 493
30 % 11 100 495
Entity #2 | Chains: B,E
DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3') dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3') dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures