Sequence Similarity Clusters for the Entities in PDB 4F0M

Entity #1 | Chains: A
Ribulose bisphosphate carboxylase large chain protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 24381
95 % 3 5 4142 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 3 5 4167
70 % 3 6 3132
50 % 19 46 171
40 % 21 55 145
30 % 33 84 117
Entity #2 | Chains: B
Ribulose bisphosphate carboxylase small chain protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27819
95 % 3 3 23084
90 % 3 5 4307
70 % 3 5 4230
50 % 3 6 3142
40 % 3 6 3062
30 % 3 6 2871

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.