Sequence Similarity Clusters for the Entities in PDB 4F0M

Entity #1 | Chains: A
Ribulose bisphosphate carboxylase large chain protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25488
95 % 3 5 4344 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 3 5 4376
70 % 3 7 2207
50 % 20 49 131
40 % 22 58 124
30 % 34 88 92
Entity #2 | Chains: B
Ribulose bisphosphate carboxylase small chain protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29075
95 % 3 3 24141 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 5 4531
70 % 3 5 4451
50 % 3 6 3280
40 % 3 6 3186
30 % 3 6 2992

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures