Sequence Similarity Clusters for the Entities in PDB 4F0M

Entity #1 | Chains: A
Ribulose bisphosphate carboxylase large chain protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25976
95 % 3 5 4422 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 3 5 4452
70 % 4 8 1622
50 % 22 51 124
40 % 24 60 121
30 % 36 90 94
Entity #2 | Chains: B
Ribulose bisphosphate carboxylase small chain protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29583
95 % 3 3 24517 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 5 4609
70 % 3 5 4527
50 % 4 7 2292
40 % 4 7 2279
30 % 4 7 2173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures