Sequence Similarity Clusters for the Entities in PDB 4EZ9

Entity #1 | Chains: A,D
DNA polymerase protein, length: 592 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 884
95 % 12 95 290 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 12 95 302
70 % 12 95 346
50 % 12 95 411
40 % 12 95 435
30 % 12 95 436
Entity #2 | Chains: B,E
DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(2DT))-3') dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*GP*TP*CP*AP*GP*G)-3') dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.