Sequence Similarity Clusters for the Entities in PDB 4EYI

Entity #1 | Chains: B
DNA polymerase iota protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 38 925
95 % 35 40 1189 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 35 40 1218
70 % 35 40 1254
50 % 35 40 1296
40 % 35 40 1313
30 % 35 40 1296
Entity #2 | Chains: T
DNA template dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA primer dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.