Sequence Similarity Clusters for the Entities in PDB 4ES4

Entity #1 | Chains: A,C,E,G
Putative cyclic di-GMP regulator CdgR protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 11960
95 % 2 2 11556
90 % 2 2 11396
70 % 2 2 10765
50 % 2 2 9682
40 % 2 2 8778
30 % 3 3 6074
Entity #2 | Chains: B,D,F,H
Flagellar transcriptional regulator FlhD protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6328
95 % 3 3 6873
90 % 3 3 6844
70 % 4 4 5583
50 % 4 4 5262
40 % 4 4 4950
30 % 4 4 4444

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.