Sequence Similarity Clusters for the Entities in PDB 4EOP

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18657
95 % 220 376 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 220 376 34
70 % 220 376 42
50 % 227 401 55
40 % 231 457 41
30 % 1406 3732 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 86 158
95 % 16 105 146 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 18 109 151
70 % 18 109 172
50 % 18 109 202
40 % 18 109 225
30 % 18 115 223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.