Sequence Similarity Clusters for the Entities in PDB 4EOO

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19425
95 % 259 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 259 379 36
70 % 259 379 43
50 % 268 404 65
40 % 272 460 48
30 % 1806 3879 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 86 163
95 % 28 105 149 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 32 109 156
70 % 32 109 173
50 % 32 109 214
40 % 32 109 235
30 % 33 115 233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.