Sequence Similarity Clusters for the Entities in PDB 4EOO

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12976
95 % 266 386 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 266 386 39
70 % 266 386 51
50 % 276 436 71
40 % 279 470 60
30 % 2149 4491 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 84 190
95 % 29 106 206 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 33 110 187
70 % 33 110 207
50 % 33 110 238
40 % 33 110 265
30 % 34 116 271

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures