Sequence Similarity Clusters for the Entities in PDB 4EOM

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19487
95 % 247 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 247 379 36
70 % 247 379 44
50 % 256 404 66
40 % 260 460 49
30 % 1741 3902 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 86 166
95 % 24 105 151 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 27 109 158
70 % 27 109 175
50 % 27 109 216
40 % 27 109 235
30 % 28 115 232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.