Sequence Similarity Clusters for the Entities in PDB 4EOM

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19269
95 % 247 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 247 379 35
70 % 247 379 43
50 % 256 404 64
40 % 260 460 48
30 % 1697 3825 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 86 162
95 % 24 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 27 109 154
70 % 27 109 172
50 % 27 109 210
40 % 27 109 232
30 % 28 115 230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.