Sequence Similarity Clusters for the Entities in PDB 4EOM

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18934
95 % 247 379 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 247 379 34
70 % 247 379 41
50 % 256 404 55
40 % 260 460 43
30 % 1676 3777 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 86 160
95 % 24 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 27 109 154
70 % 27 109 172
50 % 27 109 205
40 % 27 109 229
30 % 28 115 228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.