Sequence Similarity Clusters for the Entities in PDB 4EOJ

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15044
95 % 36 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 36 383 38
70 % 36 383 46
50 % 36 433 65
40 % 37 465 54
30 % 407 4300 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 83 185
95 % 2 105 160 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 2 109 163
70 % 2 109 182
50 % 2 109 224
40 % 2 109 249
30 % 2 115 259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures