Sequence Similarity Clusters for the Entities in PDB 4EOI

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37463
95 % 222 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 222 380 38
70 % 222 380 44
50 % 229 405 68
40 % 233 462 49
30 % 1516 3966 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 86 169
95 % 17 105 155 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 19 109 160
70 % 19 109 176
50 % 19 109 219
40 % 19 109 238
30 % 19 115 242

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures