Sequence Similarity Clusters for the Entities in PDB 4EKD

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22668
95 % 2 11 3441
90 % 2 11 3481
70 % 2 11 3459
50 % 40 72 341
40 % 44 90 309
30 % 46 92 317
Entity #2 | Chains: B
Regulator of G-protein signaling 2 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19726
95 % 2 4 12787
90 % 2 4 12545
70 % 2 4 11803
50 % 9 16 1778
40 % 16 28 1131
30 % 18 33 996

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.