Sequence Similarity Clusters for the Entities in PDB 4EKD

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23432
95 % 2 11 3553
90 % 2 11 3596
70 % 2 11 3562
50 % 41 76 340
40 % 45 94 315
30 % 47 96 312
Entity #2 | Chains: B
Regulator of G-protein signaling 2 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20396
95 % 2 4 13221
90 % 2 4 12981
70 % 2 4 12212
50 % 9 16 1838
40 % 16 28 1165
30 % 18 33 1023

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.