Sequence Similarity Clusters for the Entities in PDB 4EKD

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25691
95 % 2 11 3912
90 % 2 11 3950
70 % 2 11 3896
50 % 41 77 416
40 % 45 97 352
30 % 47 99 341
Entity #2 | Chains: B
Regulator of G-protein signaling 2 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 22397
95 % 2 4 14461
90 % 2 4 14188
70 % 2 4 13333
50 % 9 16 2025
40 % 16 28 1266
30 % 18 33 1117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.