Sequence Similarity Clusters for the Entities in PDB 4EKC

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26488
95 % 11 11 4034
90 % 11 11 4072
70 % 11 11 4017
50 % 75 77 436
40 % 93 97 384
30 % 95 99 372
Entity #2 | Chains: B,D
Regulator of G-protein signaling 2 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23104
95 % 4 4 14902
90 % 4 4 14634
70 % 4 4 13736
50 % 14 16 2089
40 % 21 28 1298
30 % 23 33 1154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures