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Crystal structure of the bacterial ribosome ram mutation G299A. This entry contains the 30s ribosomal subunit of the first 70s molecule in the asymmetric unit
Sequence Clustering and Redundancy Reduction Results
4EJ9
Sequence Clusters for the Sequence Entities in PDB 4EJ9
Entity #1: Chains: A - 16S rRNA rna, length: 1522 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #10: Chains: J - 30S ribosomal protein S10 protein, length: 105 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 252 29
95% 162 254 48
90% 162 254 51
70% 162 254 63
50% 207 369 34
40% 207 369 48
30% 207 374 67
Entity #11: Chains: K - 30S ribosomal protein S11 protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 255 27
95% 162 255 44
90% 162 255 47
70% 162 255 59
50% 201 363 42
40% 205 403 39
30% 205 403 53
Entity #12: Chains: L - 30S ribosomal protein S12 protein, length: 132 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 125 224 37
95% 162 262 36
90% 162 262 38
70% 201 375 24
50% 201 375 33
40% 201 375 47
30% 201 375 71
Entity #13: Chains: M - 30S ribosomal protein S13 protein, length: 126 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 256 24
95% 162 256 42
90% 162 256 45
70% 162 256 57
50% 201 365 39
40% 201 365 53
30% 203 401 57
Entity #14: Chains: N - 30S ribosomal protein S14 type Z protein, length: 61 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 254 28
95% 162 254 49
90% 162 254 52
70% 162 254 64
50% 162 254 99
40% 162 254 124
30% 162 254 144
Entity #15: Chains: O - 30S ribosomal protein S15 protein, length: 89 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 258 21
95% 166 263 35
90% 166 263 37
70% 166 263 48
50% 208 376 32
40% 208 376 45
30% 208 376 69
Entity #16: Chains: P - 30S ribosomal protein S16 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 250 31
95% 162 255 46
90% 162 255 49
70% 162 255 61
50% 162 255 97
40% 162 255 122
30% 201 363 78
Entity #17: Chains: Q - 30S ribosomal protein S17 protein, length: 105 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 118 157 62
95% 161 249 51
90% 162 253 53
70% 162 253 65
50% 162 253 100
40% 162 253 126
30% 162 253 146
Entity #18: Chains: R - 30S ribosomal protein S18 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 130 172 49
95% 154 221 64
90% 154 221 68
70% 154 221 81
50% 154 221 116
40% 154 221 144
30% 154 221 166
Entity #19: Chains: S - 30S ribosomal protein S19 protein, length: 93 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 154 223 38
95% 154 223 63
90% 154 223 67
70% 154 223 80
50% 202 366 38
40% 202 366 52
30% 202 366 75
Entity #2: Chains: B - 30S ribosomal protein S2 protein, length: 256 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 255 25
95% 162 256 39
90% 162 256 43
70% 162 256 55
50% 162 256 96
40% 201 363 55
30% 201 363 77
Entity #20: Chains: T - 30S ribosomal protein S20 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 144 193 43
95% 162 254 47
90% 162 254 50
70% 162 254 62
50% 162 254 98
40% 162 254 123
30% 162 254 143
Entity #21: Chains: U - 30S ribosomal protein Thx protein, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 238 34
95% 162 238 55
90% 162 238 59
70% 162 238 71
50% 162 238 110
40% 162 238 133
30% 162 238 153
Entity #22: Chains: V - P-SITE tRNA fMet rna, length: 77 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #23: Chains: W,Y - E-SITE TRNA PHE OR A-SITE tRNA Phe rna, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #24: Chains: X - mRNA rna, length: 24 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - 30S ribosomal protein S3 protein, length: 239 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 153 219 39
95% 153 219 66
90% 153 219 70
70% 153 219 83
50% 168 282 81
40% 168 282 101
30% 168 282 123
Entity #4: Chains: D - 30S ribosomal protein S4 protein, length: 209 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 248 32
95% 162 256 40
90% 162 256 44
70% 162 256 56
50% 201 363 40
40% 201 364 54
30% 201 364 76
Entity #5: Chains: E - 30S ribosomal protein S5 protein, length: 162 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 255 26
95% 162 255 43
90% 162 255 46
70% 162 255 58
50% 202 367 37
40% 202 367 51
30% 202 369 72
Entity #6: Chains: F - 30S ribosomal protein S6 protein, length: 101 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 164 260 18
95% 170 266 34
90% 170 266 36
70% 170 266 47
50% 170 266 88
40% 170 266 112
30% 196 313 95
Entity #7: Chains: G - 30S ribosomal protein S7 protein, length: 156 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 163 259 20
95% 163 260 37
90% 163 260 39
70% 163 260 51
50% 189 308 57
40% 189 309 74
30% 189 309 97
Entity #8: Chains: H - 30S ribosomal protein S8 protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 255 23
95% 162 255 41
90% 163 259 40
70% 163 259 52
50% 204 369 36
40% 205 371 49
30% 208 408 50
Entity #9: Chains: I - 30S ribosomal protein S9 protein, length: 128 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 104 142 82
95% 162 255 45
90% 162 255 48
70% 162 255 60
50% 201 363 41
40% 201 363 56
30% 203 399 59
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.