Sequence Similarity Clusters for the Entities in PDB 4EGC

Entity #1 | Chains: A
Maltose-binding periplasmic protein, Homeobox protein SIX1 chimera protein, length: 559 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51683
95 % 1 1 38258
90 % 1 1 36541
70 % 1 1 32519
50 % 1 1 27880
40 % 1 1 24680
30 % 1 1 21053
Entity #2 | Chains: B
Eyes absent homolog 2 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57218
95 % 1 4 5156 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5179
70 % 1 4 5073
50 % 1 4 4863
40 % 1 4 4599
30 % 1 4 4211

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures