Sequence Similarity Clusters for the Entities in PDB 4EGC

Entity #1 | Chains: A
Maltose-binding periplasmic protein, Homeobox protein SIX1 chimera protein, length: 559 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52650
95 % 1 1 38935
90 % 1 1 37157
70 % 1 1 33048
50 % 1 1 28302
40 % 1 1 25060
30 % 1 1 21367
Entity #2 | Chains: B
Eyes absent homolog 2 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58286
95 % 1 4 5277 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5306
70 % 1 4 5192
50 % 1 4 4962
40 % 1 4 4688
30 % 1 4 4295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures