Sequence Similarity Clusters for the Entities in PDB 4EGC

Entity #1 | Chains: A
Maltose-binding periplasmic protein, Homeobox protein SIX1 chimera protein, length: 559 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50963
95 % 1 1 37732
90 % 1 1 36057
70 % 1 1 32115
50 % 1 1 27535
40 % 1 1 24383
30 % 1 1 20801
Entity #2 | Chains: B
Eyes absent homolog 2 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56427
95 % 1 4 5074 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5096
70 % 1 4 4997
50 % 1 4 4789
40 % 1 4 4533
30 % 1 4 4158

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.