Sequence Similarity Clusters for the Entities in PDB 4EFA

Entity #1 | Chains: C
V-type proton ATPase subunit C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26845
95 % 2 2 22263
90 % 2 2 21560
70 % 2 2 19764
50 % 2 2 17186
40 % 2 2 15329
30 % 2 2 13103
Entity #2 | Chains: G
V-type proton ATPase subunit G protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 1833
95 % 2 7 2387
90 % 2 7 2439
70 % 2 7 2426
50 % 2 7 2389
40 % 2 7 2366
30 % 2 7 2236
Entity #3 | Chains: E
V-type proton ATPase subunit E protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 1754
95 % 2 7 2311
90 % 2 7 2367
70 % 2 7 2357
50 % 2 7 2322
40 % 2 7 2310
30 % 2 7 2192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.