Sequence Similarity Clusters for the Entities in PDB 4EFA

Entity #1 | Chains: C
V-type proton ATPase subunit C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25812
95 % 2 2 21426
90 % 2 2 20747
70 % 2 2 19016
50 % 2 2 16565
40 % 2 2 14797
30 % 2 2 12660
Entity #2 | Chains: G
V-type proton ATPase subunit G protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 1721
95 % 2 7 2242
90 % 2 7 2282
70 % 2 7 2290
50 % 2 7 2282
40 % 2 7 2267
30 % 2 7 2142
Entity #3 | Chains: E
V-type proton ATPase subunit E protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 1643
95 % 2 7 2169
90 % 2 7 2217
70 % 2 7 2224
50 % 2 7 2221
40 % 2 7 2214
30 % 2 7 2101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.