Sequence Similarity Clusters for the Entities in PDB 4EFA

Entity #1 | Chains: C
V-type proton ATPase subunit C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25229
95 % 2 2 20991
90 % 2 2 20338
70 % 2 2 18640
50 % 2 2 16248
40 % 2 2 14536
30 % 2 2 12448
Entity #2 | Chains: G
V-type proton ATPase subunit G protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 4611
95 % 2 5 5232
90 % 2 5 5236
70 % 2 5 5136
50 % 2 5 4848
40 % 2 5 4572
30 % 2 5 4131
Entity #3 | Chains: E
V-type proton ATPase subunit E protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 4297
95 % 2 5 4957
90 % 2 5 4974
70 % 2 5 4900
50 % 2 5 4649
40 % 2 5 4390
30 % 2 5 4000

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.