Sequence Similarity Clusters for the Entities in PDB 4EFA

Entity #1 | Chains: C
V-type proton ATPase subunit C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27080
95 % 2 2 22460
90 % 2 2 21752
70 % 2 2 19942
50 % 2 2 17343
40 % 2 2 15462
30 % 2 2 13233
Entity #2 | Chains: G
V-type proton ATPase subunit G protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 1843
95 % 2 7 2407
90 % 2 7 2461
70 % 2 7 2447
50 % 2 7 2408
40 % 2 7 2377
30 % 2 7 2246
Entity #3 | Chains: E
V-type proton ATPase subunit E protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 1762
95 % 2 7 2329
90 % 2 7 2387
70 % 2 7 2377
50 % 2 7 2340
40 % 2 7 2320
30 % 2 7 2201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.